Ocean Read Atlas- Query form

Submit your gene or read sequence below to:

display its percentage of shared k-mers on ocean maps
observe its co-variation with marine environmental features (T°, O₂, nutrients etc.)

Data mined from Tara Oceans reads (user manual)
- Try an Example

Dataset:

Dataset to query.

Job title:

This text will be used to label results, downloaded files and email subjects.

Query
sequence:

Enter your DNA sequence(s) in FASTA format in the text box, or upload a FASTA file with the button below (accepted formats: .fasta,.fna,.ffn,.faa,.frn,.fa,.txt).

R threshold:

Ratio threshold of shared k-mers between 0 and 1.

Email:

Optional: If you provide an e-mail, you will receive the link of the computation directly in your mailbox.

Display options:

Maps:

Select number of maps to display shared k-mers biogeography of your query sequence(s).

Bubble plots:

Select number of bubble plots to display shared k-mers ratio of your request among an environmental variable and the sampling depth.

Ocean Read Atlas

One Click Marine K-mer Biogeography

Submit your gene or read sequence below to:

Display options: